Table 1 Number of variants captured by each platform
From: A comparison of whole genome sequencing with exome sequencing for family-based association studies
Platform | Number of variants | Number of common variants |
|---|---|---|
Whole genome sequencing | 8,348,674 | 4,152,114 |
Exome sequencing (Agilent) | 129,204 | 58,091 |
Exome sequencing (Illumina) | 156,910 | 70,347 |
Exome sequencing (NimbleGen) | 113,150 | 50,000 |
GWAS SNPs | 453,285 | 425,734 |